BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019H08SP1|AL427541
(970 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1561 1676 0.0
3x_Contig328 107 4e-23
>3x_Contig1561
Length = 10959
Score = 1676 bits (830), Expect = 0.0
Identities = 861/884 (97%)
Strand = Plus / Minus
Query: 87 agrgtakacktgcscgagagtgagagcgaggaattttttcgtgattgrgggggtgtctta 146
|| ||| || ||| ||| ||| |||||||||||||||||||||||| || |||||||||
Sbjct: 4841 agagtatacttgcccgaaagtaagagcgaggaattttttcgtgatttaggaggtgtctta 4782
Query: 147 tctgargttcaaccagtgaacacatcggcatctaagattaacggtggtgatttacacggt 206
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4781 tctgaagttcaaccagtgaacacatcggcatctaagattaacggtggtgatttacacggt 4722
Query: 207 tttattggcccggtgatccatgarggtagttttgataaattggccaaagtgattgacgat 266
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 4721 tttattggcccggtgatccatgaaggtagttttgataaattggccaaagtgattgacgat 4662
Query: 267 gccaagaacgatccagaattggraattgttttcggaggcttccatgataaatctaagggt 326
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 4661 gccaagaacgatccagaattggaaattgttttcggaggcttccatgataaatctaagggt 4602
Query: 327 tattacatccaaccaacaatcataaagactacaaatccaagacatccttatttragccaa 386
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 4601 tattacatccaaccaacaatcataaagactacaaatccaagacatccttatttaagccaa 4542
Query: 387 gaattctttggtccaatattgactgtwtacgaatatccagacgcaaaattcgaagacgtg 446
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 4541 gaattctttggtccaatattgactgtatacgaatatccagacgcaaaattcgaagacgtg 4482
Query: 447 tgtgarctggttgattccaccagccaatatggtttarcgggrtccatattcgcccgtgac 506
||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 4481 tgtgaactggttgattccaccagccaatatggtttaacgggatccatattcgcccgtgac 4422
Query: 507 cgtgaggctattaagatcgctgatgaraaattgaratacagtgcaggaaacttctacatc 566
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 4421 cgtgaggctattaagatcgctgatgaaaaattgaaatacagtgcaggaaacttctacatc 4362
Query: 567 aacgataaatctaccggggctgttgtcgctcaacaatggtttggtggtgccagartgagc 626
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 4361 aacgataaatctaccggggctgttgtcgctcaacaatggtttggtggtgccagaatgagc 4302
Query: 627 ggtactaatgacaaggccgggtctggraatatcttgaacagatttgttagcgtcaggaac 686
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 4301 ggtactaatgacaaggccgggtctggaaatatcttgaacagatttgttagcgtcaggaac 4242
Query: 687 atcaaagaaaactattatgaattgacagactacagatatccatccaattacgaataagta 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4241 atcaaagaaaactattatgaattgacagactacagatatccatccaattacgaataagta 4182
Query: 747 tatcgacctgcatgaactttaaattcccaatctatataaatgtacaaatacctaaactct 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4181 tatcgacctgcatgaactttaaattcccaatctatataaatgtacaaatacctaaactct 4122
Query: 807 tcaagaaataaagtctttttttagcgaaacggagacaaccttggacatgtatacgacagt 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4121 tcaagaaataaagtctttttttagcgaaacggagacaaccttggacatgtatacgacagt 4062
Query: 867 cacgctgtaagtkctactttcgatggtgcatgcccaagatctctcaagcagcttcattgt 926
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4061 cacgctgtaagtgctactttcgatggtgcatgcccaagatctctcaagcagcttcattgt 4002
Query: 927 atatgaggatgccttgtctttcaaacaggsacatgtccgggtga 970
||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 4001 atatgaggatgccttgtctttcaaacaggcacatgtccgggtga 3958
>3x_Contig328
Length = 2419
Score = 107 bits (53), Expect = 4e-23
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 1 gggggggggggggggggggggggggggggggggggggggggaggggggggsgggggagg 59
||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 100 ggggggggggggggggggggggggggggggggggggggggggggggggggggggggagg 42
Score = 101 bits (50), Expect = 3e-21
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 1 gggggggggggggggggggggggggggggggggggggggggaggggggggsggggg 56
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 104 gggggggggggggggggggggggggggggggggggggggggggggggggggggggg 49
Score = 101 bits (50), Expect = 3e-21
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 1 gggggggggggggggggggggggggggggggggggggggggaggggggggsggggg 56
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 102 gggggggggggggggggggggggggggggggggggggggggggggggggggggggg 47
Score = 101 bits (50), Expect = 3e-21
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 1 gggggggggggggggggggggggggggggggggggggggggaggggggggsggggg 56
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 107 gggggggggggggggggggggggggggggggggggggggggggggggggggggggg 52
Score = 101 bits (50), Expect = 3e-21
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 1 gggggggggggggggggggggggggggggggggggggggggaggggggggsggggg 56
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 108 gggggggggggggggggggggggggggggggggggggggggggggggggggggggg 53
Score = 101 bits (50), Expect = 3e-21
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 1 gggggggggggggggggggggggggggggggggggggggggaggggggggsggggg 56
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 103 gggggggggggggggggggggggggggggggggggggggggggggggggggggggg 48
Score = 101 bits (50), Expect = 3e-21
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 1 gggggggggggggggggggggggggggggggggggggggggaggggggggsggggg 56
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 105 gggggggggggggggggggggggggggggggggggggggggggggggggggggggg 50
Score = 101 bits (50), Expect = 3e-21
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 1 gggggggggggggggggggggggggggggggggggggggggaggggggggsggggg 56
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 106 gggggggggggggggggggggggggggggggggggggggggggggggggggggggg 51
Score = 101 bits (50), Expect = 3e-21
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 1 gggggggggggggggggggggggggggggggggggggggggaggggggggsggggg 56
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 101 gggggggggggggggggggggggggggggggggggggggggggggggggggggggg 46
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9560
Number of Sequences: 1807
Number of extensions: 9560
Number of successful extensions: 2563
Number of sequences better than 1.0e-20: 2
length of query: 970
length of database: 10,358,551
effective HSP length: 16
effective length of query: 954
effective length of database: 10,329,639
effective search space: 9854475606
effective search space used: 9854475606
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.7 bits)
S2: 50 (101.5 bits)